woodsw@hc-vmolpathviaT:~$ sudo apt-get install samtools
Reading package lists... Done
Building dependency tree
Reading state information... Done
The following packages were automatically installed and are no longer required:
libgsl2 libhts1
Use 'sudo apt autoremove' to remove them.
The following packages will be REMOVED:
bcftools
The following NEW packages will be installed:
samtools
0 upgraded, 1 newly installed, 1 to remove and 30 not upgraded.
Need to get 0 B/562 kB of archives.
After this operation, 537 kB of additional disk space will be used.
Do you want to continue? [Y/n] y
(Reading database ... 231072 files and directories currently installed.)
Removing bcftools (1.2-2) ...
Processing triggers for man-db (2.7.5-1) ...
Selecting previously unselected package samtools.
(Reading database ... 231054 files and directories currently installed.)
Preparing to unpack .../samtools_0.1.19-1ubuntu1_amd64.deb ...
Unpacking samtools (0.1.19-1ubuntu1) ...
Processing triggers for man-db (2.7.5-1) ...
Setting up samtools (0.1.19-1ubuntu1) ...
===========
woodsw@hc-vmolpathviaT:~$ sudo apt-get install samtools
Reading package lists... Done
Building dependency tree
Reading state information... Done
The following packages were automatically installed and are no longer required:
libgsl2 libhts1
Use 'sudo apt autoremove' to remove them.
The following packages will be REMOVED:
bcftools
The following NEW packages will be installed:
samtools
0 upgraded, 1 newly installed, 1 to remove and 30 not upgraded.
Need to get 0 B/562 kB of archives.
After this operation, 537 kB of additional disk space will be used.
Do you want to continue? [Y/n] y
(Reading database ... 231072 files and directories currently installed.)
Removing bcftools (1.2-2) ...
Processing triggers for man-db (2.7.5-1) ...
Selecting previously unselected package samtools.
(Reading database ... 231054 files and directories currently installed.)
Preparing to unpack .../samtools_0.1.19-1ubuntu1_amd64.deb ...
Unpacking samtools (0.1.19-1ubuntu1) ...
Processing triggers for man-db (2.7.5-1) ...
Setting up samtools (0.1.19-1ubuntu1) ...
woodsw@hc-vmolpathviaT:~$ sudo apt-get install bcftools
Reading package lists... Done
Building dependency tree
Reading state information... Done
Suggested packages:
python-matplotlib texlive-latex-recommended
The following packages will be REMOVED:
samtools
The following NEW packages will be installed:
bcftools
0 upgraded, 1 newly installed, 1 to remove and 30 not upgraded.
Need to get 0 B/275 kB of archives.
After this operation, 537 kB disk space will be freed.
Do you want to continue? [Y/n] y
(Reading database ... 231099 files and directories currently installed.)
Removing samtools (0.1.19-1ubuntu1) ...
Processing triggers for man-db (2.7.5-1) ...
Selecting previously unselected package bcftools.
(Reading database ... 231054 files and directories currently installed.)
Preparing to unpack .../bcftools_1.2-2_amd64.deb ...
Unpacking bcftools (1.2-2) ...
Processing triggers for man-db (2.7.5-1) ...
Setting up bcftools (1.2-2) ...