chris@ubuntu:~/warzone2100-3.1.2$ ./autogen.sh
+ checking for autoconf >= 2.56 ... found 2.69, ok.
+ checking for automake >= 1.11 ... found 1.14.1, ok.
+ running aclocal ...
+ running autoheader ... 
+ running autoconf ... 
+ running automake ... 
configure.ac:74: warning: The 'AM_PROG_MKDIR_P' macro is deprecated, and its use is discouraged.
configure.ac:74: You should use the Autoconf-provided 'AC_PROG_MKDIR_P' macro instead,
configure.ac:74: and use '$(MKDIR_P)' instead of '$(mkdir_p)'in your Makefile.am files.
tests/Makefile.am:17: warning: source file '../tools/map/mapload.cpp' is in a subdirectory,
tests/Makefile.am:17: but option 'subdir-objects' is disabled
automake: warning: possible forward-incompatibility.
automake: At least a source file is in a subdirectory, but the 'subdir-objects'
automake: automake option hasn't been enabled.  For now, the corresponding output
automake: object file(s) will be placed in the top-level directory.  However,
automake: this behaviour will change in future Automake versions: they will
automake: unconditionally cause object files to be placed in the same subdirectory
automake: of the corresponding sources.
automake: You are advised to start using 'subdir-objects' option throughout your
automake: project, to avoid future incompatibilities.
+ removing config.cache ... 

Now type './configure && make' to compile.
chris@ubuntu:~/warzone2100-3.1.2$ ./configure && make
./configure: line 2157: config.log: Permission denied
./configure: line 2167: config.log: Permission denied
chris@ubuntu:~/warzone2100-3.1.2$ ^C
chris@ubuntu:~/warzone2100-3.1.2$ sudo apt-get warzone2100
[sudo] password for chris: 
E: Invalid operation warzone2100
chris@ubuntu:~/warzone2100-3.1.2$ make install
make: *** No rule to make target 'install'.  Stop.
chris@ubuntu:~/warzone2100-3.1.2$ make
make: *** No targets specified and no makefile found.  Stop.
chris@ubuntu:~/warzone2100-3.1.2$ ./configure
./configure: line 2157: config.log: Permission denied
./configure: line 2167: config.log: Permission denied
chris@ubuntu:~/warzone2100-3.1.2$ sudo apt-get install
Reading package lists... Done
Building dependency tree       
Reading state information... Done
0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded.
chris@ubuntu:~/warzone2100-3.1.2$ ./configure && make
./configure: line 2157: config.log: Permission denied
./configure: line 2167: config.log: Permission denied